Sample Submission Guidelines — Morrisville
For Gene Expression, Genotyping (US), Biologics, all GLP/CLIA Projects and Other Services.
Express Sequencing
| Sample Type | Minimum Sample Requirements |
|---|---|
| Plasmid DNA or Purified PCR Products |
500 ng per sequencing reaction at 50 ng/µl in 10 µl of water |
| Plasmid DNA and Primer Mixed |
500 ng per sequencing reaction at 50 ng/µl - DNA 8 pmol Primer at 0.8 pmol/µl - Primer in a total volume of 10 µl |
| Primer |
8 pmol per sequencing reaction at 0.8 pmol/µl in 10 µl |
Regulatory Submission Sequencing
| Sample Type | Minimum Sample Requirements |
|---|---|
| Bacterial Samples |
Low Copy- 1-2 mls of 109-1010cells/ml High Copy- 1-2 mls of 108-109 cells/ml |
| Yeast Samples |
1-2 mls of 108 cells/ml |
| Mammalian Samples |
1-2 ml of 107 cells/ml |
Research Grade Sequencing
| Sample Type | Minimum Sample Requirements |
|---|---|
|
Plasmid DNA |
300-500 ng per sequencing reaction (minimum concentration 100ng/µl) DNA as a dried down pellet, or in molecular biology grade water or elution buffer, NOT in TE. |
| PCR Product |
20 ng for each 100 bp of amplicon per sequencing reaction (PCR Products must be single band and purified, additional charges will incur for enzymatic purification or gel extraction) |
High Throughput Sequencing (96-well format)
| Sample Type | Minimum Sample Requirements |
|---|---|
| Bacterial Samples |
Glycerol stock-HT (~108 cells/ml) 100 µl/ sample |
| DNA |
10µl at 100ng/µl per well |
Sequencing — All Types
| Sample Type | Minimum Sample Requirements |
|---|---|
| Stab or streak cultures |
1 stab or plate |
| Viral DNA | generally 300 ng of DNA per sequencing reaction (exact amount will be included in quotation) |
| BAC clone | generally 300 ng of DNA per sequencing reaction (exact amount will be included in quotation) |
| RNA | 2 µg minimum in water, TE or elution buffer |
| Primer | 10 µl of 8 pmol/µl dilution of the primer per sequencing reaction (50 ng/ul for a 20-mer) Please note that not all PCR primers are optimum for sequencing. Primers should be approximately 20 bases long and the melting temperature should be between 50-65 degrees Celsius. |
Shotgun Library Construction
| Sample Type | Minimum Sample Requirements |
|---|---|
| Purified viral particles | 1-2 mls of 1012 pfu/ml |
| DNA | 20 µg |
| Stab or plates | 1 stab or plate |
| Glycerol Stock | 100 µl (~108 cells/ml) |
Genetic Stability Testing
| Sample Type | Minimum Sample Requirements |
|---|---|
| Southern Blot-Copy Number Southern Blot-Insertion Number Southern Blot-Structural Map |
This amount will vary depeding on the digest number and the blot set up. Please see your quotation for materials required. Mammalian = 20 µg of DNA/digest Yeast and Bacteria 5-10 µg DNA/digest |
| Phage Testing Plasmid Loss |
Bacterial 1ml (108 cells/ml) |
| Northern Blot Restriction Enzyme Analysis |
Bacterial 1ml (108 cells/ml) Yeast 1 ml (107 cells/ml) Mammalian 1ml (106 cells/ml) (wet cell pellet - at least 3 grams or 100 ml) |
Quantitative PCR
| Sample Type | Minimum Sample Requirements |
|---|---|
| Cell Banks - Bacterial | 1-2 ml (108 cells/ml) |
| Cell Banks - Yeast | 1-2 ml (107 cells/ml) |
| Cell Banks - Mammalian | 1-2 ml (106 cells/ml) |
| Tissue | 10-25 mg |
| Whole Blood | 1 ml |
| DNA | 500 ng |
| RNA | 500 ng |
GMO Testing
| Sample Type | Minimum Sample Requirements |
|---|---|
| PCR Method | 500 ng of young leaf per sample |
| Southern Method | 3 g of young leaf per sample |
Genotyping
| Sample Type | Minimum Sample Requirements |
|---|---|
| PCR/Agarose Gel method | 50-100 ng per PCR reaction |
| SNP & STR | custom, please call Beckman Coulter Genomics for further information |
Other Services
| Sample Type | Minimum Sample Requirements |
|---|---|
| Subcloning | custom, please call Beckman Coulter Genomics for further information |
| Northern Blot Restriction Enzyme Analysis |
Bacterial 1ml (108 cells/ml) Yeast 1 ml (107 cells/ml) Mammalian 1ml (106 cells/ml) (wet cell pellet - at least 3 grams or 100 ml) |
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